My client paid for an SSL cert and got this message from Foxycart on 10/31/12:
We're all finished setting up your custom SSL certificate. It looks like you still need to set up your CNAME record; everything else is set up and ready to go.
Instructions on setting up your CNAME record are available here: http://wiki.foxycart.com/docs:remotedomain:setup#site_dns_setup
After you have set up your DNS record and verified that it's working properly, you will need to update your FoxyCart store's "use remote domain" setting and update your site's add-to-cart links and any links to scripts included from the FoxyCart servers.
I just launched the site, moved it from my server to www.kontour.com. We're still on the test payment gateway, but I switched to 'store remote domain' and entered 'secure.kontour.com' as instructed by the client. She set up the CNAME record on 10/31 as well.
I just changed all the script links throughout the site from kontour.foxycart.com to secure.kontour.com. Now on every page I get the 'Kontour is not currently set up' warning popup. You can see it here:
What am I doing wrong? Before I changed to secure.kontour.com and changed the script links, I was able to run a test order and view all pages with no problem at all.